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Bug #4339 (Require Feedback): References can not be found by searching

Scratchpads issue queue - Mon, 2015-03-02 12:42

Hello,
I added five references to the literature of my scratchpad by RIS import some days ago and these indeed show up in the list under "content - biblio". However, I can't find them through a regular search in "Biblio: Author". The system knows the authors names though, but does not generate a correct reference list. This problem holds for the following papers:
Truong et al. (2014). Phytotaxa
Li & Bi (2014). Phytotaxa
Mar & Saunders (2015). Phytokeys
Tsukayas & Okada (2012). Syst. Bot.
Nuraliev et al. (2014). Phytotaxa
Interestingly, the Nuraliev et al. (2014) can be found over "Biblio: Secondary Title", when searched after 'Phytotaxa', but the other two Phytotaxa papers (Li & Bi, Truong et al.) do not appear. When searched in "Biblio: Publication Year" none of them can be found.
Bug or misappliance?

Best wishes,
Stephan

Bug #4338 (Require Feedback): Empty type status value created in imported specimens

Scratchpads issue queue - Tue, 2015-02-24 15:23

I have imported a few new specimen records. Links to these now appear on the taxon overview page.
Example: http://ethoikos.myspecies.info/fauna-checklist-la-selva/operophtera-brumata

Bug #4337 (Active): cannot remove link to calendar at bottom of page

Scratchpads issue queue - Tue, 2015-02-24 08:35

Hi, there is a link to 'calendar' at the bottom of my events pages - but I can see if there is an option to remove this link.

Bug #4336 (Active): Name of collector and identifier not displayed consistently

Scratchpads issue queue - Mon, 2015-02-23 08:17

The names of Collector and Identifier are not displayed consistently on the site. In the Specimens Grid the two fields include the values "Other/Given Name(s)" and "Family name" e.g. "A. Smith" (correct). On the Specimen page is displayed only "Family name" e.g. "Smith" (incorrect).

Bug #4334 (Active): Error meassge when trying to run import to taxonomy

Scratchpads issue queue - Wed, 2015-02-18 15:24

I get this message:

Importing

An error has occurred.
Please continue to the error page
An AJAX HTTP error occurred. HTTP Result Code: 500 Debugging information follows. Path: /batch?render=overlay&id=4589&op=do StatusText: Internal Server Error ResponseText:

I have looked for strange parent/child relations in the template.
Could you have a look please.
Nicholas

Bug #4333 (Active): Maps on Overview tab not showing from map on Descriptions tab

Scratchpads issue queue - Tue, 2015-02-17 11:17

Since last week, the map on a species' overview page shows the "default" UK-centred map, not the map that can be seen by clicking on the Descriptions tab (this presumes a map exists in a species description). So, for example, the map on the Descriptions page of Acherontia atropos (http://sphingidae.myspecies.info/taxonomy/term/263/descriptions) is correct in showing its distribution. However, this is not what appears on the Overview page (http://sphingidae.myspecies.info/taxonomy/term/263). The same is true of all other taxa (as far as I can determine) for which a map is included on the Descriptions page.

Bug #4332 (Active): Pages linked to wrong species page

Scratchpads issue queue - Mon, 2015-02-16 18:02

There are three extraneous pages that have appeared under the Descriptions tab for the species Catillaria fungoides (http://fungi.myspecies.info/all-fungi/catillaria-fungoides) - the Descriptions tab has the page address http://fungi.myspecies.info/taxonomy/term/6824/descriptions. The three extraneous pages are titled The Lost & Found Fungi Project, BLS New Reports and Lichens C. There was a fourth one (Survey Diary 2015) which I deleted as they all appeared to be duplicates of the pages in their correct positions on the website, but both versions have now disappeared. (see http://fungi.myspecies.info/content/survey-diary-2015). The taxonomic hierarchy displayed when you click on the Descriptions tab for the species has an extra inclusion of the species name between Home and Fungi.
I don't think I did anything stupid, but please could you fix this asap?
Many thanks
Paul

Feature #4331 (Active): Search Sorting

Scratchpads issue queue - Mon, 2015-02-16 09:43

Having performed a search and used a facet to filter down the results, it would be great to be able to sort the results by date (i.e. date ascending or date descending). Is this possible?

Bug #4330 (Active): Lost data!

Scratchpads issue queue - Sun, 2015-02-15 09:51

Hi, it looks like I lost all my data in the citations content type (http://milichiidae.info/citation), species description content type (e.g. http://milichiidae.info/node/6855#overlay-context=node/22777), museum holdings content type, links content type, taxon descriptions and specimens. In locations all but the map is gone.
The nodes, basic pages and images are still there and are linked, but everything else is gone.

The same is true for the Diptera site at http://diptera.myspecies.info.

Please fix as soon as possible!

Bug #4329 (Active): Only 10 first records exported from the specimens view as csv

Scratchpads issue queue - Thu, 2015-02-12 17:20

Only 10 records are exported when requested as csv files from the specimens view page

e.g. http://thymus.myspecies.info/taxonomy/term/75/specimens
See attached for the export.

Also filtering of the view is not reflected to the exported csv. e.g. filtering by a taxon name (though I am not sure whether this is a bug or a expected behaviour)

Bug #4328 (Active): Error adding biblio

Scratchpads issue queue - Thu, 2015-02-12 16:15

When I try to add a biblio record via DOI auto-fill from this doi 10.1186/s12862-015-0287-3

I get the following error after I attempt to save:

"Volume cannot be longer than 128 characters but is currently 146 characters long".

Bug #4327 (Active): Specimen/Observation: collector vs. user

Scratchpads issue queue - Thu, 2015-02-12 11:15

Hi Simon,

is there any chance to decouple the collectors name from the registered scratchpad user (cf. *.jpg)?!?

Thx,
so long,
bjoerns

Bug #4326 (Active): specimens - what happend here?

Scratchpads issue queue - Wed, 2015-02-11 20:56

I wanted to check for a specimen on my website... and there was only an error! I did not change anything here in the last weeks... but it seems not to work anymore.

Bug #4325 (Active): Author names being cropped on DOI import when a special character is in the name

Scratchpads issue queue - Wed, 2015-02-11 09:02

Hi Simon, When you import a biblio entry with a DOI, if the author name has a special character in it, the preceding letters are lost. For example, “GONZÁLEZ-ACUÑA” becomes “ÁLEZ-ACUÑA” on import. I repeatedly have to manually correct these and I presume the problem is on the import side rather than the export as it happens with more or less every author when there are special characters,

Bug #4324 (Active): Can't find "Roles capabilities"

Scratchpads issue queue - Wed, 2015-02-11 07:46

Dear Support-Team,

As co-maintainer of FGO I would like to allow users with editor role to contribute to the classification/taxonomy, means to allow importing new names and kin via the excel template. But I cannot find the "Roles capabilities" page (cf. attachment) within the recent administration menue?!?
Please be so kind and point me to the correct node...

Thx,
so long,
bjoerns

Bug #4323 (Active): Error generating citation PDFs - cite me button

Scratchpads issue queue - Tue, 2015-02-10 11:48

Tested on several sites, when clicking on the cite me button the following error is returned:
There was an error generating the PDF citation:

see:
http://coralwio.myspecies.info/node/3

Bug #4322 (Active): %profile[] not working on webform

Scratchpads issue queue - Mon, 2015-02-09 21:02

Hi SP,

The help text says we should be able to use %profile[profile_givennames] on the webform to populate values, but its doesn't seem to be working - example, this one:

http://phasmid-study-group.org/content/e-mail-livestock-co-ordinators

The "Your Name" field should autopopulate and its not (at least for me, anyway).

Secondly...I wish to have the PSG Membership Number box auto-populate from user:field_psg_no - anyway to do this?

Thank you
Natalie

Bug #4321 (Active): broken image icons in media field

Scratchpads issue queue - Mon, 2015-02-09 16:53

On specimen record pages, "broken image" icons appear in place of appropriate icons for attached text (.txt) and Excel (.xls) files.

E.g.: http://mormyrids.myspecies.info/node/448#overlay-context=node/448

Bug #4320 (Active): Drupal update

Scratchpads issue queue - Sun, 2015-02-08 21:23

My Scratchpad installation is telling me that a new Drupal version is available, plus module updates. Since I have a managed server instance I was wondering if I can just download the latest source from the Scratchpads repository and update from there?

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Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith